Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC3Q9UQE7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMC3Q9UQE7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.07
SMC3Q9UQE7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.7■■□□□ 1.07
SMC3Q9UQE7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 MIR564-202ENST00000385049 94 ntBASIC21.7■■□□□ 1.06
SMC3Q9UQE7 AL023284.2-201ENST00000405850 579 ntBASIC21.7■■□□□ 1.06
SMC3Q9UQE7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC3Q9UQE7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 CD177P1-201ENST00000606252 935 ntBASIC21.69■■□□□ 1.06
SMC3Q9UQE7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.69■■□□□ 1.06
SMC3Q9UQE7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 FAM201B-201ENST00000458407 597 ntBASIC21.68■■□□□ 1.06
SMC3Q9UQE7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 AC096733.2-201ENST00000609937 1394 ntBASIC21.68■■□□□ 1.06
SMC3Q9UQE7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 GPAT2P1-201ENST00000444924 1672 ntBASIC21.68■■□□□ 1.06
SMC3Q9UQE7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms