Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 AC011840.4-201ENST00000578471 627 ntBASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 AC009154.2-201ENST00000621177 724 ntBASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.22■□□□□ 0.99
SYNPO2Q9UMS6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SYNPO2Q9UMS6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 TSPY12P-201ENST00000421279 868 ntBASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 AC074051.2-201ENST00000565115 352 ntBASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.2■□□□□ 0.98
SYNPO2Q9UMS6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 KRT18P31-201ENST00000506277 1292 ntBASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 RN7SL510P-201ENST00000581311 263 ntBASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 AP005901.3-202ENST00000581653 237 ntBASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPO2Q9UMS6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 LINC01126-201ENST00000623515 1646 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 POM121L3P-201ENST00000419331 1163 ntBASIC21.18■□□□□ 0.98
SYNPO2Q9UMS6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms