Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 KRT89P-201ENST00000620027 1478 ntBASIC19.49■□□□□ 0.71
CDH9Q9ULB4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 RNF126P1-202ENST00000569893 925 ntBASIC19.49■□□□□ 0.71
CDH9Q9ULB4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH9Q9ULB4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 AL121672.3-201ENST00000608644 468 ntBASIC19.48■□□□□ 0.71
CDH9Q9ULB4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH9Q9ULB4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 BX276092.5-203ENST00000456199 560 ntBASIC19.47■□□□□ 0.71
CDH9Q9ULB4 KRT8P26-201ENST00000534154 1276 ntBASIC19.47■□□□□ 0.71
CDH9Q9ULB4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 AC005332.3-201ENST00000589904 676 ntBASIC19.47■□□□□ 0.71
CDH9Q9ULB4 AC093458.2-201ENST00000623150 629 ntBASIC19.47■□□□□ 0.71
CDH9Q9ULB4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH9Q9ULB4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 RNF165-205ENST00000588679 2904 ntBASIC19.46■□□□□ 0.71
CDH9Q9ULB4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 TSPY22P-201ENST00000427496 604 ntBASIC19.46■□□□□ 0.71
CDH9Q9ULB4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 AC008687.5-201ENST00000593746 558 ntBASIC19.46■□□□□ 0.71
CDH9Q9ULB4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms