Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA9Q9UGM1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA9Q9UGM1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA9Q9UGM1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA9Q9UGM1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 HCG11-201ENST00000411553 5696 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AL162741.1-201ENST00000565563 1558 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AC034236.2-201ENST00000606662 1610 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 HMGA1P5-201ENST00000412453 271 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AL512604.3-201ENST00000569583 964 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 WWOX-216ENST00000569818 525 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 CR769767.2-201ENST00000622735 460 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 KRT8P45-201ENST00000414328 1447 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA9Q9UGM1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA9Q9UGM1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 KRT18P41-201ENST00000518924 1277 ntBASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 AC133561.5-201ENST00000635547 218 ntBASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA9Q9UGM1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms