Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 AC010980.2-201ENST00000587099 1412 ntBASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD3Q9UBI1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 AC022211.2-201ENST00000585075 2527 ntBASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 CNN2P6-201ENST00000439038 900 ntBASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 NKILA-202ENST00000614771 2598 ntBASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD3Q9UBI1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 AC011676.5-201ENST00000624864 2660 ntBASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 CYP2T1P-201ENST00000432607 1285 ntBASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 BID-214ENST00000617586 542 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.25■□□□□ 0.19
COMMD3Q9UBI1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 FLJ13224-201ENST00000313737 1514 ntBASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 KRT18P11-201ENST00000435214 1283 ntBASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 RCC2P6-201ENST00000526625 1557 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms