Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 AP000593.1-201ENST00000393668 712 ntBASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 AC012615.1-201ENST00000565797 1299 ntBASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.84■□□□□ 0.45
LRIT1Q9P2V4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 AL163051.1-201ENST00000569214 1512 ntBASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 AL049812.1-201ENST00000432563 2267 ntBASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRIT1Q9P2V4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 AL845331.1-201ENST00000424978 1190 ntBASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 GUSBP12-201ENST00000513727 720 ntBASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRIT1Q9P2V4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 AC004870.1-201ENST00000315132 882 ntBASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 AC104819.1-201ENST00000504587 486 ntBASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 UNC93B7-201ENST00000509439 705 ntBASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 KRT18P41-201ENST00000518924 1277 ntBASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT1Q9P2V4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 FOSL1P1-201ENST00000511041 816 ntBASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 AL121772.3-201ENST00000610840 674 ntBASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 AC124864.1-201ENST00000623408 392 ntBASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 AC083906.6-201ENST00000641366 219 ntBASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT1Q9P2V4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms