Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 KRT8P50-201ENST00000562022 1438 ntBASIC19.53■□□□□ 0.72
CHD7Q9P2D1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 IRX1P1-201ENST00000438849 1838 ntBASIC19.53■□□□□ 0.72
CHD7Q9P2D1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AC083906.6-201ENST00000641366 219 ntBASIC19.53■□□□□ 0.72
CHD7Q9P2D1 AC079781.4-201ENST00000641908 219 ntBASIC19.53■□□□□ 0.72
CHD7Q9P2D1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.52■□□□□ 0.72
CHD7Q9P2D1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHD7Q9P2D1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 UNC93B6-202ENST00000528242 690 ntBASIC19.52■□□□□ 0.71
CHD7Q9P2D1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 AC004817.3-201ENST00000602957 2129 ntBASIC19.52■□□□□ 0.71
CHD7Q9P2D1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD7Q9P2D1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD7Q9P2D1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 AC023274.1-201ENST00000418278 595 ntBASIC19.5■□□□□ 0.71
CHD7Q9P2D1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD7Q9P2D1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms