Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 PRELID1P1-202ENST00000567272 903 ntBASIC19.07■□□□□ 0.64
VPS45Q9NRW7 RN7SL510P-201ENST00000581311 263 ntBASIC19.07■□□□□ 0.64
VPS45Q9NRW7 HYMAI.1-201ENST00000620949 238 ntBASIC19.07■□□□□ 0.64
VPS45Q9NRW7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS45Q9NRW7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FDX1P1-201ENST00000449115 551 ntBASIC19.06■□□□□ 0.64
VPS45Q9NRW7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS45Q9NRW7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 AC004870.1-201ENST00000315132 882 ntBASIC19.05■□□□□ 0.64
VPS45Q9NRW7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 AC111152.3-201ENST00000569699 673 ntBASIC19.05■□□□□ 0.64
VPS45Q9NRW7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS45Q9NRW7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.04■□□□□ 0.64
VPS45Q9NRW7 AC092119.3-201ENST00000612618 583 ntBASIC19.04■□□□□ 0.64
VPS45Q9NRW7 NPAP1P7-201ENST00000613027 823 ntBASIC19.04■□□□□ 0.64
VPS45Q9NRW7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS45Q9NRW7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS45Q9NRW7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms