Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PKP4Q99569 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.99■□□□□ 0.47
PKP4Q99569 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.99■□□□□ 0.47
PKP4Q99569 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 AC104390.1-201ENST00000555663 520 ntBASIC17.99■□□□□ 0.47
PKP4Q99569 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.99■□□□□ 0.47
PKP4Q99569 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PKP4Q99569 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PKP4Q99569 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PKP4Q99569 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.99■□□□□ 0.47
PKP4Q99569 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.99■□□□□ 0.47
PKP4Q99569 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.98■□□□□ 0.47
PKP4Q99569 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PKP4Q99569 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.98■□□□□ 0.47
PKP4Q99569 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.98■□□□□ 0.47
PKP4Q99569 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 AC099343.3-201ENST00000605834 2503 ntBASIC17.98■□□□□ 0.47
PKP4Q99569 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PKP4Q99569 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.98■□□□□ 0.47
PKP4Q99569 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PKP4Q99569 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PKP4Q99569 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 NEFHP1-201ENST00000412845 2629 ntBASIC17.97■□□□□ 0.47
PKP4Q99569 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PKP4Q99569 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PKP4Q99569 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 KRT18P57-201ENST00000443599 1254 ntBASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 SEC1P-202ENST00000473944 940 ntBASIC17.97■□□□□ 0.47
PKP4Q99569 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.97■□□□□ 0.47
PKP4Q99569 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 AL163051.1-201ENST00000569214 1512 ntBASIC17.97■□□□□ 0.47
PKP4Q99569 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PKP4Q99569 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PKP4Q99569 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PKP4Q99569 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.96■□□□□ 0.47
PKP4Q99569 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.96■□□□□ 0.47
PKP4Q99569 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PKP4Q99569 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms