Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 FAM58CP-201ENST00000435741 640 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CD74-212ENST00000524315 584 ntTSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 KRT17P8-201ENST00000540749 863 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC092552.1-201ENST00000547243 906 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 HNRNPUP1-201ENST00000554987 333 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC112492.5-201ENST00000421897 457 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 TK1-204ENST00000590430 683 ntTSL 3 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC017083.2-201ENST00000608069 979 ntBASIC5.6□□□□□ -1.51
HMCN1Q96RW7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMCN1Q96RW7 BCAR1-209ENST00000546196 1340 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 REXO1L6P-201ENST00000603433 1515 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC010654.1-201ENST00000615722 808 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 MIR663B-201ENST00000408361 115 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 SPTLC1P1-201ENST00000447199 261 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AC106886.1-201ENST00000568660 600 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 AL355334.1-201ENST00000417713 215 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 TREML5P-201ENST00000421694 576 ntBASIC5.59□□□□□ -1.51
HMCN1Q96RW7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMCN1Q96RW7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms