Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 MIR4785-201ENST00000585005 73 ntBASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 Z99916.2-201ENST00000604037 246 ntBASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H2AAQ96QV6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 AC112777.1-201ENST00000540175 1423 ntBASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 AP003071.4-201ENST00000562276 1284 ntBASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 REXO1L10P-201ENST00000615707 1290 ntBASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 REXO1L12P-201ENST00000622156 912 ntBASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H2AAQ96QV6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 KRT17P2-201ENST00000300992 1314 ntBASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 UNC93B2-201ENST00000285383 730 ntBASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 CA15P1-201ENST00000481698 905 ntBASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H2AAQ96QV6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 AC005082.1-201ENST00000413042 2259 ntBASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H2AAQ96QV6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H2AAQ96QV6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms