Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AC190387.1-201ENST00000551683 408 ntBASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 Z83851.2-201ENST00000609564 659 ntBASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AL035252.4-201ENST00000624174 288 ntBASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AL162377.1-201ENST00000618844 1793 ntBASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.69■□□□□ 0.1
CSMD1Q96PZ7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 MCCD1P1-208ENST00000445732 328 ntBASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 UNC93B6-202ENST00000528242 690 ntBASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 AL096865.1-201ENST00000606796 927 ntBASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 AC010240.3-201ENST00000607688 395 ntBASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD1Q96PZ7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 AC138761.1-201ENST00000584393 385 ntBASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 AC011467.4-201ENST00000594891 528 ntBASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 GPR32P1-201ENST00000601788 811 ntBASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 HLA-V-201ENST00000429037 534 ntBASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 RNA5SP415-201ENST00000517246 115 ntBASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD1Q96PZ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD1Q96PZ7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms