Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYNGAP1Q96PV0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 AC106795.1-205ENST00000512851 1056 ntBASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 LINC00167-201ENST00000530583 1419 ntBASIC20.96■□□□□ 0.95
SYNGAP1Q96PV0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SYNGAP1Q96PV0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 IGHV3-47-201ENST00000425060 335 ntBASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 RN7SL606P-201ENST00000472779 293 ntBASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 GUSBP12-201ENST00000513727 720 ntBASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 AC138894.3-201ENST00000603787 634 ntBASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYNGAP1Q96PV0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AP002469.2-201ENST00000531724 424 ntBASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AC004263.2-201ENST00000617183 678 ntBASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SYNGAP1Q96PV0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 AC005332.7-201ENST00000614046 2005 ntBASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.93■□□□□ 0.94
SYNGAP1Q96PV0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms