Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2A3Q93084 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 HTR7P1-202ENST00000624664 4411 ntBASIC19.45■□□□□ 0.7
ATP2A3Q93084 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2A3Q93084 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 AC036111.1-201ENST00000533973 1582 ntBASIC19.44■□□□□ 0.7
ATP2A3Q93084 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 TEX21P-204ENST00000641479 1693 ntBASIC19.44■□□□□ 0.7
ATP2A3Q93084 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 AL023284.2-201ENST00000405850 579 ntBASIC19.44■□□□□ 0.7
ATP2A3Q93084 MCCD1P1-208ENST00000445732 328 ntBASIC19.44■□□□□ 0.7
ATP2A3Q93084 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 AL049812.1-201ENST00000432563 2267 ntBASIC19.44■□□□□ 0.7
ATP2A3Q93084 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2A3Q93084 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2A3Q93084 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 RASA4DP-201ENST00000460726 1199 ntBASIC19.43■□□□□ 0.7
ATP2A3Q93084 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 MIR3180-5-201ENST00000583743 153 ntBASIC19.43■□□□□ 0.7
ATP2A3Q93084 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 AL138781.2-201ENST00000617896 1843 ntBASIC19.43■□□□□ 0.7
ATP2A3Q93084 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP2A3Q93084 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP2A3Q93084 KRT8P3-201ENST00000519669 1449 ntBASIC19.42■□□□□ 0.7
ATP2A3Q93084 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms