Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TM9SF4Q92544 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TM9SF4Q92544 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TM9SF4Q92544 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TM9SF4Q92544 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 AL450487.1-201ENST00000426799 995 ntBASIC17.41■□□□□ 0.38
TM9SF4Q92544 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 CR769767.2-201ENST00000622735 460 ntBASIC17.41■□□□□ 0.38
TM9SF4Q92544 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.41■□□□□ 0.38
TM9SF4Q92544 AC020763.4-201ENST00000623414 4170 ntBASIC17.41■□□□□ 0.38
TM9SF4Q92544 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TM9SF4Q92544 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms