Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 CHCHD2P8-201ENST00000429873 447 ntBASIC31.59■■■□□ 2.65
TRIM41Q8WV44 PNKD-204ENST00000436005 978 ntTSL 5 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 SEC1P-202ENST00000473944 940 ntBASIC31.59■■■□□ 2.65
TRIM41Q8WV44 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM41Q8WV44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 AL031284.1-201ENST00000419297 478 ntBASIC31.58■■■□□ 2.65
TRIM41Q8WV44 PAWRP1-201ENST00000451083 565 ntBASIC31.58■■■□□ 2.65
TRIM41Q8WV44 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 RFPL4AP1-201ENST00000530883 850 ntBASIC31.58■■■□□ 2.65
TRIM41Q8WV44 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
TRIM41Q8WV44 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
TRIM41Q8WV44 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
TRIM41Q8WV44 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 AC134684.3-201ENST00000641758 218 ntBASIC31.57■■■□□ 2.64
TRIM41Q8WV44 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 HEIH-201ENST00000623091 1652 ntBASIC31.57■■■□□ 2.64
TRIM41Q8WV44 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC31.57■■■□□ 2.64
TRIM41Q8WV44 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 ELP6-205ENST00000439305 880 ntTSL 2 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
TRIM41Q8WV44 KRT18P28-201ENST00000453838 1332 ntBASIC31.55■■■□□ 2.64
TRIM41Q8WV44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 KRT8P26-201ENST00000534154 1276 ntBASIC31.55■■■□□ 2.64
TRIM41Q8WV44 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
TRIM41Q8WV44 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 AC112482.1-201ENST00000492080 688 ntBASIC31.54■■■□□ 2.64
TRIM41Q8WV44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM41Q8WV44 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM41Q8WV44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms