Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 KRT8P50-201ENST00000562022 1438 ntBASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH3RF2Q8TEC5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH3RF2Q8TEC5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH3RF2Q8TEC5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 AC009065.1-201ENST00000564055 1225 ntBASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 AL691432.3-201ENST00000621860 400 ntBASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH3RF2Q8TEC5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 AL390719.2-201ENST00000606993 987 ntBASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH3RF2Q8TEC5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 TPM4P1-201ENST00000436100 807 ntBASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH3RF2Q8TEC5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms