Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 AL357033.4-201ENST00000617703 1807 ntBASIC25.68■■□□□ 1.7
TMC1Q8TDI8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.68■■□□□ 1.7
TMC1Q8TDI8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 KRT18P48-201ENST00000434763 852 ntBASIC25.67■■□□□ 1.7
TMC1Q8TDI8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 AC092119.3-201ENST00000612618 583 ntBASIC25.67■■□□□ 1.7
TMC1Q8TDI8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 HEIH-201ENST00000623091 1652 ntBASIC25.67■■□□□ 1.7
TMC1Q8TDI8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
TMC1Q8TDI8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
TMC1Q8TDI8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 NFYC-AS1-201ENST00000606277 1687 ntBASIC25.65■■□□□ 1.7
TMC1Q8TDI8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 Z98044.1-201ENST00000632503 1764 ntBASIC25.65■■□□□ 1.7
TMC1Q8TDI8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 ATP5G2P1-201ENST00000433580 426 ntBASIC25.65■■□□□ 1.7
TMC1Q8TDI8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMC1Q8TDI8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 MIR662-201ENST00000384847 95 ntBASIC25.64■■□□□ 1.7
TMC1Q8TDI8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMC1Q8TDI8 CLEC4GP1-201ENST00000596555 870 ntBASIC25.64■■□□□ 1.7
TMC1Q8TDI8 AC016734.2-201ENST00000624325 1377 ntBASIC25.64■■□□□ 1.69
TMC1Q8TDI8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMC1Q8TDI8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
TMC1Q8TDI8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
TMC1Q8TDI8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMC1Q8TDI8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMC1Q8TDI8 MTMR9LP-203ENST00000426597 1545 ntBASIC25.63■■□□□ 1.69
TMC1Q8TDI8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMC1Q8TDI8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
TMC1Q8TDI8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMC1Q8TDI8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
TMC1Q8TDI8 DUSP5P1-201ENST00000441325 1139 ntBASIC25.63■■□□□ 1.69
TMC1Q8TDI8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms