Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CCHCR1Q8TD31 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 KRT8P11-201ENST00000409686 1436 ntBASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCHCR1Q8TD31 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCHCR1Q8TD31 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 KRT8P45-201ENST00000414328 1447 ntBASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 AC004951.3-201ENST00000418645 1148 ntBASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 AP003071.4-201ENST00000562276 1284 ntBASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 MIR6786-201ENST00000616843 113 ntBASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCHCR1Q8TD31 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms