Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CTCFLQ8NI51 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 AC126763.1-201ENST00000552015 2118 ntBASIC21.52■■□□□ 1.04
CTCFLQ8NI51 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 FAM8A6P-201ENST00000407496 1135 ntBASIC21.52■■□□□ 1.04
CTCFLQ8NI51 RASA4DP-201ENST00000460726 1199 ntBASIC21.52■■□□□ 1.04
CTCFLQ8NI51 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 AL157888.1-201ENST00000631930 593 ntBASIC21.52■■□□□ 1.04
CTCFLQ8NI51 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTCFLQ8NI51 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.52■■□□□ 1.03
CTCFLQ8NI51 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CTCFLQ8NI51 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTCFLQ8NI51 WIZP1-201ENST00000531444 2299 ntBASIC21.52■■□□□ 1.03
CTCFLQ8NI51 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTCFLQ8NI51 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CTCFLQ8NI51 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 SPDYE15P-201ENST00000424157 909 ntBASIC21.51■■□□□ 1.03
CTCFLQ8NI51 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.51■■□□□ 1.03
CTCFLQ8NI51 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTCFLQ8NI51 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.49■■□□□ 1.03
CTCFLQ8NI51 KRT18P38-201ENST00000449496 1282 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms