Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC104581.1-202ENST00000635932 2618 ntBASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 ZNF444P1-201ENST00000559497 298 ntBASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01555Q8NAE3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 AL121956.5-201ENST00000625261 221 ntBASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01555Q8NAE3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 FAM86EP-206ENST00000510506 987 ntBASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 AC009113.1-201ENST00000570267 2443 ntBASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 AL024508.2-201ENST00000607749 1894 ntBASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01555Q8NAE3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC01555Q8NAE3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms