Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SIX5Q8N196 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.88■□□□□ 0.61
SIX5Q8N196 HMGN1P19-201ENST00000436976 333 ntBASIC18.88■□□□□ 0.61
SIX5Q8N196 AC132008.2-207ENST00000454517 770 ntBASIC18.88■□□□□ 0.61
SIX5Q8N196 AC018712.1-201ENST00000455767 687 ntBASIC18.88■□□□□ 0.61
SIX5Q8N196 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.88■□□□□ 0.61
SIX5Q8N196 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.88■□□□□ 0.61
SIX5Q8N196 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.88■□□□□ 0.61
SIX5Q8N196 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.88■□□□□ 0.61
SIX5Q8N196 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIX5Q8N196 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
SIX5Q8N196 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.88■□□□□ 0.61
SIX5Q8N196 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIX5Q8N196 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.87■□□□□ 0.61
SIX5Q8N196 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SIX5Q8N196 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.87■□□□□ 0.61
SIX5Q8N196 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.87■□□□□ 0.61
SIX5Q8N196 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.87■□□□□ 0.61
SIX5Q8N196 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.87■□□□□ 0.61
SIX5Q8N196 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIX5Q8N196 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.87■□□□□ 0.61
SIX5Q8N196 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SIX5Q8N196 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.87■□□□□ 0.61
SIX5Q8N196 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
SIX5Q8N196 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.87■□□□□ 0.61
SIX5Q8N196 AL139424.1-201ENST00000607572 797 ntBASIC18.87■□□□□ 0.61
SIX5Q8N196 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.87■□□□□ 0.61
SIX5Q8N196 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIX5Q8N196 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIX5Q8N196 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
SIX5Q8N196 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SIX5Q8N196 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.86■□□□□ 0.61
SIX5Q8N196 AC034236.2-201ENST00000606662 1610 ntBASIC18.86■□□□□ 0.61
SIX5Q8N196 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.86■□□□□ 0.61
SIX5Q8N196 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.86■□□□□ 0.61
SIX5Q8N196 AC114341.1-201ENST00000618070 349 ntBASIC18.86■□□□□ 0.61
SIX5Q8N196 FAM215A-202ENST00000632077 792 ntBASIC18.86■□□□□ 0.61
SIX5Q8N196 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIX5Q8N196 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 TREX1-205ENST00000625293 1783 ntBASIC18.86■□□□□ 0.61
SIX5Q8N196 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.86■□□□□ 0.61
SIX5Q8N196 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SIX5Q8N196 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
SIX5Q8N196 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX5Q8N196 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms