Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 LINC01568-207ENST00000641790 1380 ntBASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 WWOX-216ENST00000569818 525 ntBASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC116Q8IYX3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KRT8P50-201ENST00000562022 1438 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AP000593.1-201ENST00000393668 712 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AC087499.1-201ENST00000418141 1075 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KRT18P23-201ENST00000435622 1283 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AC135050.7-201ENST00000624508 2218 ntBASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC116Q8IYX3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 BICD1-207ENST00000551848 1962 ntBASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC116Q8IYX3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms