Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.62■■□□□ 1.21
USP48Q86UV5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
USP48Q86UV5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
USP48Q86UV5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
USP48Q86UV5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.61■■□□□ 1.21
USP48Q86UV5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USP48Q86UV5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 KRT18P31-201ENST00000506277 1292 ntBASIC22.61■■□□□ 1.21
USP48Q86UV5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 LINC01711-201ENST00000598340 967 ntBASIC22.61■■□□□ 1.21
USP48Q86UV5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USP48Q86UV5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.61■■□□□ 1.21
USP48Q86UV5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
USP48Q86UV5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USP48Q86UV5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
USP48Q86UV5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.6■■□□□ 1.21
USP48Q86UV5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
USP48Q86UV5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
USP48Q86UV5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
USP48Q86UV5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
USP48Q86UV5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.6■■□□□ 1.21
USP48Q86UV5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 AC106795.1-205ENST00000512851 1056 ntBASIC22.6■■□□□ 1.21
USP48Q86UV5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.6■■□□□ 1.21
USP48Q86UV5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.6■■□□□ 1.21
USP48Q86UV5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.6■■□□□ 1.21
USP48Q86UV5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
USP48Q86UV5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
USP48Q86UV5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
USP48Q86UV5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
USP48Q86UV5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 MRPL3P1-201ENST00000400109 1033 ntBASIC22.59■■□□□ 1.21
USP48Q86UV5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
USP48Q86UV5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.59■■□□□ 1.21
USP48Q86UV5 DRAXINP1-201ENST00000437611 948 ntBASIC22.59■■□□□ 1.21
USP48Q86UV5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.59■■□□□ 1.21
USP48Q86UV5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.59■■□□□ 1.21
USP48Q86UV5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
USP48Q86UV5 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.59■■□□□ 1.21
USP48Q86UV5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
USP48Q86UV5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
USP48Q86UV5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.59■■□□□ 1.21
USP48Q86UV5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
USP48Q86UV5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP48Q86UV5 GPAT2P1-201ENST00000444924 1672 ntBASIC22.58■■□□□ 1.21
USP48Q86UV5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
USP48Q86UV5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.58■■□□□ 1.21
USP48Q86UV5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
USP48Q86UV5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP48Q86UV5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
USP48Q86UV5 HLA-F-220ENST00000434407 884 ntBASIC22.58■■□□□ 1.21
USP48Q86UV5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.58■■□□□ 1.21
USP48Q86UV5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.58■■□□□ 1.21
USP48Q86UV5 AL671883.3-201ENST00000603274 991 ntBASIC22.58■■□□□ 1.21
USP48Q86UV5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.58■■□□□ 1.21
USP48Q86UV5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.58■■□□□ 1.21
USP48Q86UV5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.58■■□□□ 1.21
USP48Q86UV5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
USP48Q86UV5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
USP48Q86UV5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP48Q86UV5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.57■■□□□ 1.2
USP48Q86UV5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms