Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 SIRPAP1-201ENST00000448467 1770 ntBASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 KRT18P41-201ENST00000518924 1277 ntBASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM1Q86UE6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 AL645608.8-201ENST00000606034 2086 ntBASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 AC008403.3-201ENST00000598924 454 ntBASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 MTDHP1-201ENST00000605323 784 ntBASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 AL445675.2-201ENST00000620291 557 ntBASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 AC012317.2-201ENST00000623305 2251 ntBASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms