Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 MIR564-202ENST00000385049 94 ntBASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 AP000593.1-201ENST00000393668 712 ntBASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 SAPCD2P3-201ENST00000455031 850 ntBASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI1Q7Z5J4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 AL121772.3-201ENST00000610840 674 ntBASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAI1Q7Z5J4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AC087289.5-201ENST00000586076 3175 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 VENTXP7-201ENST00000475503 772 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AL662844.1-201ENST00000546340 181 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 BNIP3P18-201ENST00000593976 575 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 AC124864.1-201ENST00000623408 392 ntBASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RAI1Q7Z5J4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 TNXA-203ENST00000507684 2038 ntBASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 AC098818.2-201ENST00000564925 2320 ntBASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 AC093503.3-201ENST00000624917 2352 ntBASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms