Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.23□□□□□ -0.45
SCXQ7RTU7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SCXQ7RTU7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 AK4P3-201ENST00000418260 669 ntBASIC12.22□□□□□ -0.45
SCXQ7RTU7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 BX664615.1-201ENST00000443558 458 ntBASIC12.22□□□□□ -0.45
SCXQ7RTU7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
SCXQ7RTU7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SCXQ7RTU7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.21□□□□□ -0.45
SCXQ7RTU7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SCXQ7RTU7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SCXQ7RTU7 AL691432.2-201ENST00000607222 2038 ntBASIC12.21□□□□□ -0.46
SCXQ7RTU7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SCXQ7RTU7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SCXQ7RTU7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCXQ7RTU7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SCXQ7RTU7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.21□□□□□ -0.46
SCXQ7RTU7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.21□□□□□ -0.46
SCXQ7RTU7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SCXQ7RTU7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SCXQ7RTU7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.2□□□□□ -0.46
SCXQ7RTU7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SCXQ7RTU7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SCXQ7RTU7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SCXQ7RTU7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.2□□□□□ -0.46
SCXQ7RTU7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SCXQ7RTU7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SCXQ7RTU7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms