Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 AC124864.1-201ENST00000623408 392 ntBASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC149Q6ZUS6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC149Q6ZUS6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC149Q6ZUS6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 AL353692.3-201ENST00000407031 1396 ntBASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC149Q6ZUS6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 SAPCD2P3-201ENST00000455031 850 ntBASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 RN7SL606P-201ENST00000472779 293 ntBASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 BX640515.1-201ENST00000617215 977 ntBASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC149Q6ZUS6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 MTMR9LP-203ENST00000426597 1545 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AL163051.1-201ENST00000569214 1512 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 HLA-A-201ENST00000376802 1334 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 IGHV3-47-201ENST00000425060 335 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AC064862.7-201ENST00000604520 867 ntBASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC149Q6ZUS6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC149Q6ZUS6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms