Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTR9Q6PD62 AP000974.1-201ENST00000623909 2387 ntBASIC21.91■■□□□ 1.1
CTR9Q6PD62 MYLKP1-201ENST00000509077 1580 ntBASIC21.91■■□□□ 1.1
CTR9Q6PD62 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.91■■□□□ 1.1
CTR9Q6PD62 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.91■■□□□ 1.1
CTR9Q6PD62 AC112777.1-201ENST00000540175 1423 ntBASIC21.91■■□□□ 1.1
CTR9Q6PD62 CROCCP3-202ENST00000420820 1947 ntBASIC21.91■■□□□ 1.1
CTR9Q6PD62 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.91■■□□□ 1.1
CTR9Q6PD62 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CTR9Q6PD62 ANO7L1-203ENST00000602586 1720 ntBASIC21.91■■□□□ 1.1
CTR9Q6PD62 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.91■■□□□ 1.1
CTR9Q6PD62 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTR9Q6PD62 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 AL031598.1-201ENST00000561511 1773 ntBASIC21.9■■□□□ 1.1
CTR9Q6PD62 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 AC011498.5-201ENST00000592027 486 ntBASIC21.9■■□□□ 1.1
CTR9Q6PD62 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.9■■□□□ 1.1
CTR9Q6PD62 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTR9Q6PD62 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CTR9Q6PD62 AC087289.5-201ENST00000586076 3175 ntBASIC21.89■■□□□ 1.1
CTR9Q6PD62 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CTR9Q6PD62 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTR9Q6PD62 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 RNF126P1-202ENST00000569893 925 ntBASIC21.89■■□□□ 1.09
CTR9Q6PD62 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CTR9Q6PD62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTR9Q6PD62 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CTR9Q6PD62 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
CTR9Q6PD62 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTR9Q6PD62 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTR9Q6PD62 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CTR9Q6PD62 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.87■■□□□ 1.09
CTR9Q6PD62 AC009065.1-201ENST00000564055 1225 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms