Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 AC009102.3-201ENST00000623118 1491 ntBASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SWSAP1Q6NVH7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 SDHAP2-201ENST00000455183 2001 ntBASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 AP002383.4-201ENST00000442518 975 ntBASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 AC005082.1-201ENST00000413042 2259 ntBASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SWSAP1Q6NVH7 AP000974.1-201ENST00000623909 2387 ntBASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 AL390719.2-201ENST00000606993 987 ntBASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.52■□□□□ 0.88
SWSAP1Q6NVH7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SWSAP1Q6NVH7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SWSAP1Q6NVH7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 IGHGP-201ENST00000390555 1178 ntBASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 CHCHD2P8-201ENST00000429873 447 ntBASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 MIR3180-1-201ENST00000580374 94 ntBASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 MIR3180-3-201ENST00000584616 94 ntBASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 AC092329.2-201ENST00000598402 547 ntBASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SWSAP1Q6NVH7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 AL031598.1-201ENST00000561511 1773 ntBASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms