Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 MTDHP4-201ENST00000600287 670 ntBASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 AC107918.4-202ENST00000641623 219 ntBASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PTCRAQ6ISU1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 LINC01521-201ENST00000504184 1943 ntBASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 MIR770-201ENST00000390219 98 ntBASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 AC068472.1-201ENST00000474589 881 ntBASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCRAQ6ISU1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AC254562.1-201ENST00000417586 456 ntBASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 AL138831.2-201ENST00000606564 490 ntBASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCRAQ6ISU1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 MCCD1P2-201ENST00000423228 335 ntBASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 YBX1P5-201ENST00000509441 847 ntBASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 MIR4469-201ENST00000583919 79 ntBASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 AC064836.3-201ENST00000607928 673 ntBASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 AC106028.4-201ENST00000614509 607 ntBASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCRAQ6ISU1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms