Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 AC111152.3-201ENST00000569699 673 ntBASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.69■□□□□ 0.1
ARFGEF3Q5TH69 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 RNF165-205ENST00000588679 2904 ntBASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 KRT8P26-201ENST00000534154 1276 ntBASIC15.68■□□□□ 0.1
ARFGEF3Q5TH69 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AC020763.4-201ENST00000623414 4170 ntBASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AC024563.2-201ENST00000603282 481 ntBASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AL732292.2-201ENST00000609649 430 ntBASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ARFGEF3Q5TH69 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.66■□□□□ 0.1
ARFGEF3Q5TH69 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms