Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00242Q5T6M2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 AL137784.2-201ENST00000607332 1000 ntBASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 AC012317.2-201ENST00000623305 2251 ntBASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00242Q5T6M2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00242Q5T6M2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00242Q5T6M2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00242Q5T6M2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
LINC00242Q5T6M2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00242Q5T6M2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 HTR7P1-201ENST00000538670 1336 ntBASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms