Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SYCNQ0VAF6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AC026471.5-201ENST00000615068 467 ntBASIC12.24□□□□□ -0.45
SYCNQ0VAF6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AC073592.3-201ENST00000625118 1834 ntBASIC12.24□□□□□ -0.45
SYCNQ0VAF6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SYCNQ0VAF6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AL109659.2-201ENST00000606809 1674 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 NEFHP1-201ENST00000412845 2629 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 CA15P1-201ENST00000481698 905 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 REXO1L10P-201ENST00000615707 1290 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 REXO1L12P-201ENST00000622156 912 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 TMEM191A-211ENST00000637163 1067 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AP006294.2-201ENST00000641667 209 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AC126763.1-201ENST00000552015 2118 ntBASIC12.23□□□□□ -0.45
SYCNQ0VAF6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SYCNQ0VAF6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.22□□□□□ -0.45
SYCNQ0VAF6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms