Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SMAD3P84022 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
SMAD3P84022 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMAD3P84022 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMAD3P84022 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD3P84022 HLA-J-201ENST00000462773 1622 ntBASIC19.91■□□□□ 0.78
SMAD3P84022 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMAD3P84022 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD3P84022 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 AP006288.1-201ENST00000446065 395 ntBASIC19.91■□□□□ 0.78
SMAD3P84022 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.91■□□□□ 0.78
SMAD3P84022 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD3P84022 AP001269.4-201ENST00000609611 512 ntBASIC19.91■□□□□ 0.78
SMAD3P84022 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMAD3P84022 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
SMAD3P84022 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD3P84022 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.91■□□□□ 0.78
SMAD3P84022 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 RFPL4AP1-201ENST00000530883 850 ntBASIC19.9■□□□□ 0.78
SMAD3P84022 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.9■□□□□ 0.78
SMAD3P84022 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 AC092364.2-202ENST00000597012 1073 ntBASIC19.9■□□□□ 0.78
SMAD3P84022 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
SMAD3P84022 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.9■□□□□ 0.78
SMAD3P84022 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
SMAD3P84022 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SMAD3P84022 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMAD3P84022 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 RCN1P2-201ENST00000398357 915 ntBASIC19.89■□□□□ 0.77
SMAD3P84022 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD3P84022 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 RNA5SP416-201ENST00000516838 111 ntBASIC19.89■□□□□ 0.77
SMAD3P84022 RNA5SP415-201ENST00000517246 115 ntBASIC19.89■□□□□ 0.77
SMAD3P84022 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD3P84022 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD3P84022 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.89■□□□□ 0.77
SMAD3P84022 AC002347.1-201ENST00000569543 541 ntBASIC19.89■□□□□ 0.77
SMAD3P84022 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SMAD3P84022 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMAD3P84022 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
SMAD3P84022 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD3P84022 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD3P84022 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
SMAD3P84022 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.88■□□□□ 0.77
SMAD3P84022 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.88■□□□□ 0.77
SMAD3P84022 AC211486.1-202ENST00000416371 468 ntBASIC19.88■□□□□ 0.77
SMAD3P84022 METTL21AP1-201ENST00000438852 635 ntBASIC19.88■□□□□ 0.77
SMAD3P84022 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.88■□□□□ 0.77
SMAD3P84022 AC092910.1-201ENST00000482027 1129 ntBASIC19.88■□□□□ 0.77
SMAD3P84022 AC211476.1-201ENST00000503899 468 ntBASIC19.88■□□□□ 0.77
SMAD3P84022 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 AC021087.4-201ENST00000563761 564 ntBASIC19.88■□□□□ 0.77
SMAD3P84022 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMAD3P84022 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SMAD3P84022 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms