Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.55□□□□□ -0.24
APOC4P55056 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 AL391807.1-203ENST00000604392 2365 ntBASIC13.55□□□□□ -0.24
APOC4P55056 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
APOC4P55056 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
APOC4P55056 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
APOC4P55056 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
APOC4P55056 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.55□□□□□ -0.24
APOC4P55056 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOC4P55056 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
APOC4P55056 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC4P55056 HLA-F-220ENST00000434407 884 ntBASIC13.54□□□□□ -0.24
APOC4P55056 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 BX276092.5-203ENST00000456199 560 ntBASIC13.54□□□□□ -0.24
APOC4P55056 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC4P55056 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.54□□□□□ -0.24
APOC4P55056 KRT18P41-201ENST00000518924 1277 ntBASIC13.54□□□□□ -0.24
APOC4P55056 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC4P55056 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC4P55056 AL121672.3-201ENST00000608644 468 ntBASIC13.54□□□□□ -0.24
APOC4P55056 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
APOC4P55056 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
APOC4P55056 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC4P55056 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC4P55056 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC4P55056 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC4P55056 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
APOC4P55056 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC4P55056 AC011498.5-201ENST00000592027 486 ntBASIC13.53□□□□□ -0.24
APOC4P55056 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 AC112777.1-201ENST00000540175 1423 ntBASIC13.53□□□□□ -0.24
APOC4P55056 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms