Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATN1P54259 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.31■□□□□ 0.84
ATN1P54259 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATN1P54259 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATN1P54259 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATN1P54259 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.31■□□□□ 0.84
ATN1P54259 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.31■□□□□ 0.84
ATN1P54259 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.31■□□□□ 0.84
ATN1P54259 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 AC034105.1-201ENST00000563488 319 ntBASIC20.31■□□□□ 0.84
ATN1P54259 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 AC005336.2-201ENST00000593183 939 ntBASIC20.31■□□□□ 0.84
ATN1P54259 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.31■□□□□ 0.84
ATN1P54259 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.31■□□□□ 0.84
ATN1P54259 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATN1P54259 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATN1P54259 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.3■□□□□ 0.84
ATN1P54259 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.3■□□□□ 0.84
ATN1P54259 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.3■□□□□ 0.84
ATN1P54259 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 MIR3687-2-201ENST00000577708 61 ntBASIC20.3■□□□□ 0.84
ATN1P54259 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.3■□□□□ 0.84
ATN1P54259 MIR3687-1-201ENST00000614492 61 ntBASIC20.3■□□□□ 0.84
ATN1P54259 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.3■□□□□ 0.84
ATN1P54259 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.3■□□□□ 0.84
ATN1P54259 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 FEM1AP3-201ENST00000403722 1741 ntBASIC20.3■□□□□ 0.84
ATN1P54259 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.3■□□□□ 0.84
ATN1P54259 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATN1P54259 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ATN1P54259 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.29■□□□□ 0.84
ATN1P54259 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ATN1P54259 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
ATN1P54259 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.29■□□□□ 0.84
ATN1P54259 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ATN1P54259 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.29■□□□□ 0.84
ATN1P54259 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 YBX2P1-201ENST00000394192 760 ntBASIC20.29■□□□□ 0.84
ATN1P54259 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.29■□□□□ 0.84
ATN1P54259 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.29■□□□□ 0.84
ATN1P54259 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.29■□□□□ 0.84
ATN1P54259 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 KRT18P3-201ENST00000451602 1288 ntBASIC20.29■□□□□ 0.84
ATN1P54259 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 SART3-203ENST00000546611 1184 ntBASIC20.29■□□□□ 0.84
ATN1P54259 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.29■□□□□ 0.84
ATN1P54259 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 AL357033.4-201ENST00000617703 1807 ntBASIC20.29■□□□□ 0.84
ATN1P54259 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ATN1P54259 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATN1P54259 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATN1P54259 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATN1P54259 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.28■□□□□ 0.84
ATN1P54259 HLA-J-201ENST00000462773 1622 ntBASIC20.28■□□□□ 0.84
ATN1P54259 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
ATN1P54259 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.28■□□□□ 0.84
ATN1P54259 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATN1P54259 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms