Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR2JP52435 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2JP52435 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR2JP52435 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR2JP52435 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
POLR2JP52435 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
POLR2JP52435 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
POLR2JP52435 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR2JP52435 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.7■□□□□ 0.42
POLR2JP52435 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR2JP52435 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
POLR2JP52435 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
POLR2JP52435 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2JP52435 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
POLR2JP52435 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR2JP52435 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
POLR2JP52435 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 AL109659.2-201ENST00000606809 1674 ntBASIC17.69■□□□□ 0.42
POLR2JP52435 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR2JP52435 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 AC011298.2-201ENST00000617989 482 ntBASIC17.69■□□□□ 0.42
POLR2JP52435 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
POLR2JP52435 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2JP52435 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR2JP52435 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2JP52435 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2JP52435 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR2JP52435 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 AC090192.1-201ENST00000517740 490 ntBASIC17.68■□□□□ 0.42
POLR2JP52435 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR2JP52435 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2JP52435 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2JP52435 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR2JP52435 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2JP52435 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms