Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CDK7P50613 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDK7P50613 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDK7P50613 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK7P50613 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK7P50613 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK7P50613 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.38■□□□□ 0.85
CDK7P50613 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK7P50613 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.38■□□□□ 0.85
CDK7P50613 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.38■□□□□ 0.85
CDK7P50613 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.38■□□□□ 0.85
CDK7P50613 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.38■□□□□ 0.85
CDK7P50613 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDK7P50613 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK7P50613 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDK7P50613 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CDK7P50613 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CDK7P50613 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDK7P50613 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK7P50613 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK7P50613 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CDK7P50613 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 AC132008.2-207ENST00000454517 770 ntBASIC20.37■□□□□ 0.85
CDK7P50613 AC018712.1-201ENST00000455767 687 ntBASIC20.37■□□□□ 0.85
CDK7P50613 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.37■□□□□ 0.85
CDK7P50613 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.37■□□□□ 0.85
CDK7P50613 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.37■□□□□ 0.85
CDK7P50613 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDK7P50613 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.37■□□□□ 0.85
CDK7P50613 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.37■□□□□ 0.85
CDK7P50613 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDK7P50613 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 IRX1P1-201ENST00000438849 1838 ntBASIC20.37■□□□□ 0.85
CDK7P50613 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDK7P50613 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.36■□□□□ 0.85
CDK7P50613 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 AC112907.3-201ENST00000577781 2400 ntBASIC20.36■□□□□ 0.85
CDK7P50613 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDK7P50613 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.36■□□□□ 0.85
CDK7P50613 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.36■□□□□ 0.85
CDK7P50613 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.36■□□□□ 0.85
CDK7P50613 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 AC114341.1-201ENST00000618070 349 ntBASIC20.36■□□□□ 0.85
CDK7P50613 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK7P50613 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDK7P50613 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDK7P50613 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDK7P50613 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK7P50613 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK7P50613 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK7P50613 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK7P50613 AC093909.1-201ENST00000504731 1122 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms