Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.62□□□□□ -0.07
CDC34P49427 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.61□□□□□ -0.07
CDC34P49427 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 RCC2P6-201ENST00000526625 1557 ntBASIC14.61□□□□□ -0.07
CDC34P49427 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDC34P49427 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 AC016769.1-201ENST00000409132 1010 ntBASIC14.61□□□□□ -0.07
CDC34P49427 AC093787.1-201ENST00000450396 207 ntBASIC14.61□□□□□ -0.07
CDC34P49427 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.61□□□□□ -0.07
CDC34P49427 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.61□□□□□ -0.07
CDC34P49427 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.61□□□□□ -0.07
CDC34P49427 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 AC231657.2-201ENST00000624556 255 ntBASIC14.61□□□□□ -0.07
CDC34P49427 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDC34P49427 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDC34P49427 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 AL645608.8-201ENST00000606034 2086 ntBASIC14.61□□□□□ -0.07
CDC34P49427 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC34P49427 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC34P49427 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC34P49427 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDC34P49427 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 AC007322.1-201ENST00000426983 750 ntBASIC14.6□□□□□ -0.07
CDC34P49427 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CDC34P49427 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
CDC34P49427 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.6□□□□□ -0.07
CDC34P49427 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CDC34P49427 FLJ13224-201ENST00000313737 1514 ntBASIC14.6□□□□□ -0.07
CDC34P49427 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CDC34P49427 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDC34P49427 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC34P49427 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.6□□□□□ -0.07
CDC34P49427 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.6□□□□□ -0.07
CDC34P49427 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms