Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1BP28222 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HTR1BP28222 MIR3917-201ENST00000580971 93 ntBASIC18.41■□□□□ 0.54
HTR1BP28222 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.41■□□□□ 0.54
HTR1BP28222 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1BP28222 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HTR1BP28222 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HTR1BP28222 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 BCL2-203ENST00000589955 5011 ntBASIC18.41■□□□□ 0.54
HTR1BP28222 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.41■□□□□ 0.54
HTR1BP28222 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HTR1BP28222 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
HTR1BP28222 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
HTR1BP28222 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
HTR1BP28222 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR1BP28222 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.4■□□□□ 0.54
HTR1BP28222 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR1BP28222 AC007613.1-201ENST00000572811 2597 ntBASIC18.39■□□□□ 0.54
HTR1BP28222 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
HTR1BP28222 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.39■□□□□ 0.54
HTR1BP28222 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.39■□□□□ 0.53
HTR1BP28222 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.39■□□□□ 0.53
HTR1BP28222 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.39■□□□□ 0.53
HTR1BP28222 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.39■□□□□ 0.53
HTR1BP28222 AC104390.1-201ENST00000555663 520 ntBASIC18.39■□□□□ 0.53
HTR1BP28222 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.39■□□□□ 0.53
HTR1BP28222 AC069148.1-201ENST00000608741 768 ntBASIC18.39■□□□□ 0.53
HTR1BP28222 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
HTR1BP28222 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.39■□□□□ 0.53
HTR1BP28222 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR1BP28222 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.38■□□□□ 0.53
HTR1BP28222 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.38■□□□□ 0.53
HTR1BP28222 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.38■□□□□ 0.53
HTR1BP28222 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HTR1BP28222 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HTR1BP28222 AL645929.1-201ENST00000420084 975 ntBASIC18.38■□□□□ 0.53
HTR1BP28222 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.38■□□□□ 0.53
HTR1BP28222 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.38■□□□□ 0.53
HTR1BP28222 AC092597.1-201ENST00000487352 616 ntBASIC18.38■□□□□ 0.53
HTR1BP28222 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.38■□□□□ 0.53
HTR1BP28222 AC093458.2-201ENST00000623150 629 ntBASIC18.38■□□□□ 0.53
HTR1BP28222 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.38■□□□□ 0.53
HTR1BP28222 AL157888.1-201ENST00000631930 593 ntBASIC18.38■□□□□ 0.53
HTR1BP28222 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HTR1BP28222 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HTR1BP28222 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1BP28222 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms