Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP24386 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP24386 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CHMP24386 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP24386 KRT8P9-201ENST00000558927 1449 ntBASIC17.3■□□□□ 0.36
CHMP24386 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP24386 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP24386 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMP24386 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMP24386 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMP24386 AC067852.2-201ENST00000590513 2313 ntBASIC17.29■□□□□ 0.36
CHMP24386 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
CHMP24386 TSPY21P-201ENST00000433481 731 ntBASIC17.29■□□□□ 0.36
CHMP24386 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP24386 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP24386 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP24386 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMP24386 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CHMP24386 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHMP24386 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP24386 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP24386 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 TSPY14P-201ENST00000303979 915 ntBASIC17.28■□□□□ 0.36
CHMP24386 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP24386 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP24386 FAM210CP-201ENST00000445714 574 ntBASIC17.28■□□□□ 0.36
CHMP24386 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 EGLN1P1-201ENST00000531623 762 ntBASIC17.28■□□□□ 0.36
CHMP24386 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP24386 CKBP1-201ENST00000565489 1086 ntBASIC17.28■□□□□ 0.36
CHMP24386 AC010947.1-201ENST00000623454 693 ntBASIC17.28■□□□□ 0.36
CHMP24386 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 CYP2D8P-201ENST00000433633 1490 ntBASIC17.28■□□□□ 0.36
CHMP24386 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CHMP24386 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP24386 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHMP24386 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP24386 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP24386 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 KRT18P22-201ENST00000402024 1347 ntBASIC17.27■□□□□ 0.36
CHMP24386 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP24386 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 AC090340.1-201ENST00000620778 4980 ntBASIC17.27■□□□□ 0.36
CHMP24386 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CHMP24386 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP24386 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP24386 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP24386 CA15P1-201ENST00000481698 905 ntBASIC17.27■□□□□ 0.36
CHMP24386 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms