Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 AC211486.1-202ENST00000416371 468 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 AC009947.1-201ENST00000444350 727 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 AC211476.1-201ENST00000503899 468 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.59■■□□□ 1.21
KCNA3P22001 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 MTDHP5-201ENST00000598980 586 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 AC107918.4-202ENST00000641623 219 ntBASIC22.59■■□□□ 1.21
KCNA3P22001 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KCNA3P22001 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KCNA3P22001 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNA3P22001 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNA3P22001 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNA3P22001 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNA3P22001 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
KCNA3P22001 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNA3P22001 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KCNA3P22001 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNA3P22001 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNA3P22001 METTL21AP1-201ENST00000438852 635 ntBASIC22.58■■□□□ 1.21
KCNA3P22001 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.58■■□□□ 1.21
KCNA3P22001 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.58■■□□□ 1.21
KCNA3P22001 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.58■■□□□ 1.21
KCNA3P22001 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.58■■□□□ 1.21
KCNA3P22001 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.58■■□□□ 1.21
KCNA3P22001 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KCNA3P22001 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.58■■□□□ 1.2
KCNA3P22001 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KCNA3P22001 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNA3P22001 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNA3P22001 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
KCNA3P22001 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
KCNA3P22001 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
KCNA3P22001 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.57■■□□□ 1.2
KCNA3P22001 AL596442.2-201ENST00000610240 980 ntBASIC22.57■■□□□ 1.2
KCNA3P22001 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNA3P22001 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
KCNA3P22001 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.57■■□□□ 1.2
KCNA3P22001 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.57■■□□□ 1.2
KCNA3P22001 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KCNA3P22001 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.56■■□□□ 1.2
KCNA3P22001 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNA3P22001 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNA3P22001 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNA3P22001 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNA3P22001 NKAPP1-205ENST00000585790 367 ntBASIC22.56■■□□□ 1.2
KCNA3P22001 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.56■■□□□ 1.2
KCNA3P22001 MTDHP4-201ENST00000600287 670 ntBASIC22.56■■□□□ 1.2
KCNA3P22001 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNA3P22001 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.56■■□□□ 1.2
KCNA3P22001 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNA3P22001 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KCNA3P22001 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.56■■□□□ 1.2
KCNA3P22001 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
KCNA3P22001 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
KCNA3P22001 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.55■■□□□ 1.2
KCNA3P22001 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.55■■□□□ 1.2
KCNA3P22001 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.55■■□□□ 1.2
KCNA3P22001 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.55■■□□□ 1.2
KCNA3P22001 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.55■■□□□ 1.2
KCNA3P22001 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KCNA3P22001 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
KCNA3P22001 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
KCNA3P22001 AC007375.3-201ENST00000600936 2314 ntBASIC22.54■■□□□ 1.2
KCNA3P22001 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.54■■□□□ 1.2
KCNA3P22001 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNA3P22001 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms