Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB5AP20339 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB5AP20339 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB5AP20339 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB5AP20339 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB5AP20339 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RAB5AP20339 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
RAB5AP20339 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5AP20339 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB5AP20339 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5AP20339 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB5AP20339 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB5AP20339 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB5AP20339 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB5AP20339 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5AP20339 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5AP20339 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB5AP20339 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5AP20339 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5AP20339 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5AP20339 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5AP20339 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 SERBP1P1-201ENST00000396021 1160 ntBASIC14.38□□□□□ -0.11
RAB5AP20339 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5AP20339 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 AC011298.3-201ENST00000615796 283 ntBASIC14.38□□□□□ -0.11
RAB5AP20339 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
RAB5AP20339 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB5AP20339 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB5AP20339 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB5AP20339 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5AP20339 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5AP20339 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5AP20339 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RAB5AP20339 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5AP20339 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.37□□□□□ -0.11
RAB5AP20339 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms