Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.54■□□□□ 0.88
SMPD1P17405 RNA5SP419-201ENST00000515908 135 ntBASIC20.54■□□□□ 0.88
SMPD1P17405 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMPD1P17405 AL591684.3-201ENST00000605187 298 ntBASIC20.54■□□□□ 0.88
SMPD1P17405 BX640515.1-201ENST00000617215 977 ntBASIC20.54■□□□□ 0.88
SMPD1P17405 AC023511.2-201ENST00000618803 211 ntBASIC20.54■□□□□ 0.88
SMPD1P17405 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.54■□□□□ 0.88
SMPD1P17405 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMPD1P17405 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.54■□□□□ 0.88
SMPD1P17405 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMPD1P17405 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.53■□□□□ 0.88
SMPD1P17405 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.53■□□□□ 0.88
SMPD1P17405 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.53■□□□□ 0.88
SMPD1P17405 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.53■□□□□ 0.88
SMPD1P17405 AC113404.2-201ENST00000507884 177 ntBASIC20.53■□□□□ 0.88
SMPD1P17405 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMPD1P17405 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.53■□□□□ 0.88
SMPD1P17405 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.53■□□□□ 0.88
SMPD1P17405 AC120114.3-201ENST00000611923 658 ntBASIC20.53■□□□□ 0.88
SMPD1P17405 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SMPD1P17405 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
SMPD1P17405 AC009102.3-201ENST00000623118 1491 ntBASIC20.53■□□□□ 0.88
SMPD1P17405 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.53■□□□□ 0.88
SMPD1P17405 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
SMPD1P17405 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMPD1P17405 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMPD1P17405 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.52■□□□□ 0.88
SMPD1P17405 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.52■□□□□ 0.88
SMPD1P17405 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.52■□□□□ 0.88
SMPD1P17405 AC096582.2-201ENST00000510860 516 ntBASIC20.52■□□□□ 0.88
SMPD1P17405 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.52■□□□□ 0.88
SMPD1P17405 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SMPD1P17405 AL671883.3-201ENST00000603274 991 ntBASIC20.52■□□□□ 0.88
SMPD1P17405 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.52■□□□□ 0.88
SMPD1P17405 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMPD1P17405 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMPD1P17405 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.52■□□□□ 0.87
SMPD1P17405 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
SMPD1P17405 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.52■□□□□ 0.87
SMPD1P17405 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMPD1P17405 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD1P17405 SDHAP2-201ENST00000455183 2001 ntBASIC20.51■□□□□ 0.87
SMPD1P17405 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD1P17405 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SMPD1P17405 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 AL590627.1-203ENST00000421194 1026 ntBASIC20.51■□□□□ 0.87
SMPD1P17405 FAM197Y8-203ENST00000450145 560 ntBASIC20.51■□□□□ 0.87
SMPD1P17405 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD1P17405 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD1P17405 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.51■□□□□ 0.87
SMPD1P17405 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.51■□□□□ 0.87
SMPD1P17405 AC114341.1-201ENST00000618070 349 ntBASIC20.51■□□□□ 0.87
SMPD1P17405 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SMPD1P17405 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMPD1P17405 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.51■□□□□ 0.87
SMPD1P17405 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD1P17405 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.5■□□□□ 0.87
SMPD1P17405 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD1P17405 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD1P17405 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMPD1P17405 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.5■□□□□ 0.87
SMPD1P17405 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD1P17405 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMPD1P17405 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMPD1P17405 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.5■□□□□ 0.87
SMPD1P17405 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.5■□□□□ 0.87
SMPD1P17405 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.5■□□□□ 0.87
SMPD1P17405 AC005336.2-201ENST00000593183 939 ntBASIC20.5■□□□□ 0.87
SMPD1P17405 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms