Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC31.56■■■□□ 2.64
CFTRP13569 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
CFTRP13569 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC31.56■■■□□ 2.64
CFTRP13569 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC31.55■■■□□ 2.64
CFTRP13569 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 LAGE3P1-201ENST00000425356 484 ntBASIC31.55■■■□□ 2.64
CFTRP13569 YBX1P5-201ENST00000509441 847 ntBASIC31.55■■■□□ 2.64
CFTRP13569 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC31.55■■■□□ 2.64
CFTRP13569 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 MTDHP4-201ENST00000600287 670 ntBASIC31.55■■■□□ 2.64
CFTRP13569 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 AC125437.2-201ENST00000625180 2167 ntBASIC31.55■■■□□ 2.64
CFTRP13569 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC31.55■■■□□ 2.64
CFTRP13569 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CFTRP13569 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CFTRP13569 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC31.54■■■□□ 2.64
CFTRP13569 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFTRP13569 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
CFTRP13569 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CFTRP13569 ASL-204ENST00000395331 1538 ntTSL 5 BASIC31.54■■■□□ 2.64
CFTRP13569 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFTRP13569 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC31.54■■■□□ 2.64
CFTRP13569 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CFTRP13569 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFTRP13569 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
CFTRP13569 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC31.53■■■□□ 2.64
CFTRP13569 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC31.53■■■□□ 2.64
CFTRP13569 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC31.53■■■□□ 2.64
CFTRP13569 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 RNF151-202ENST00000569210 853 ntTSL 2 BASIC31.53■■■□□ 2.64
CFTRP13569 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFTRP13569 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.53■■■□□ 2.64
CFTRP13569 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFTRP13569 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC31.53■■■□□ 2.64
CFTRP13569 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFTRP13569 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC31.52■■■□□ 2.64
CFTRP13569 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC31.52■■■□□ 2.64
CFTRP13569 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC31.52■■■□□ 2.64
CFTRP13569 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC31.52■■■□□ 2.64
CFTRP13569 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC31.52■■■□□ 2.64
CFTRP13569 RFPL4AP1-201ENST00000530883 850 ntBASIC31.52■■■□□ 2.64
CFTRP13569 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC31.52■■■□□ 2.64
CFTRP13569 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 AC009102.3-201ENST00000623118 1491 ntBASIC31.52■■■□□ 2.64
CFTRP13569 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CFTRP13569 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.52■■■□□ 2.64
CFTRP13569 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CFTRP13569 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 LBH-203ENST00000404397 543 ntTSL 4 BASIC31.52■■■□□ 2.64
CFTRP13569 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFTRP13569 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC31.52■■■□□ 2.64
CFTRP13569 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC31.52■■■□□ 2.64
CFTRP13569 NKAPP1-205ENST00000585790 367 ntBASIC31.52■■■□□ 2.64
CFTRP13569 RPS15-207ENST00000591032 550 ntTSL 3 BASIC31.52■■■□□ 2.64
CFTRP13569 COPE-211ENST00000600932 1144 ntTSL 5 BASIC31.52■■■□□ 2.64
CFTRP13569 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CFTRP13569 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
CFTRP13569 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CFTRP13569 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC31.51■■■□□ 2.63
CFTRP13569 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CFTRP13569 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CFTRP13569 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC31.51■■■□□ 2.63
CFTRP13569 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC31.51■■■□□ 2.63
CFTRP13569 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CFTRP13569 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC31.5■■■□□ 2.63
CFTRP13569 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFTRP13569 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms