Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT3P12035 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KRT3P12035 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT3P12035 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT3P12035 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
KRT3P12035 HOXB1-202ENST00000577092 1414 ntBASIC19.47■□□□□ 0.71
KRT3P12035 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT3P12035 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT3P12035 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT3P12035 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KRT3P12035 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
KRT3P12035 KRT8P7-201ENST00000533003 1432 ntBASIC19.46■□□□□ 0.71
KRT3P12035 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 KRT18P23-201ENST00000435622 1283 ntBASIC19.46■□□□□ 0.71
KRT3P12035 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 FAM87A-204ENST00000613235 858 ntBASIC19.46■□□□□ 0.71
KRT3P12035 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KRT3P12035 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT3P12035 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT3P12035 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT3P12035 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.46■□□□□ 0.71
KRT3P12035 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KRT3P12035 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT3P12035 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
KRT3P12035 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KRT3P12035 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.45■□□□□ 0.7
KRT3P12035 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 AC087499.1-201ENST00000418141 1075 ntBASIC19.45■□□□□ 0.7
KRT3P12035 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KRT3P12035 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT3P12035 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.45■□□□□ 0.7
KRT3P12035 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT3P12035 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
KRT3P12035 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
KRT3P12035 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT3P12035 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT3P12035 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
KRT3P12035 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT3P12035 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT3P12035 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.44■□□□□ 0.7
KRT3P12035 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT3P12035 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms