Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD48P09326 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD48P09326 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CD48P09326 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.15■□□□□ 0.66
CD48P09326 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.15■□□□□ 0.66
CD48P09326 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CD48P09326 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 KRT18P23-201ENST00000435622 1283 ntBASIC19.15■□□□□ 0.66
CD48P09326 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CD48P09326 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 FAM87A-204ENST00000613235 858 ntBASIC19.15■□□□□ 0.66
CD48P09326 AC010653.2-201ENST00000623505 997 ntBASIC19.15■□□□□ 0.66
CD48P09326 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.15■□□□□ 0.66
CD48P09326 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CD48P09326 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
CD48P09326 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
CD48P09326 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.15■□□□□ 0.66
CD48P09326 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD48P09326 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.66
CD48P09326 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD48P09326 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.14■□□□□ 0.66
CD48P09326 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.14■□□□□ 0.66
CD48P09326 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CD48P09326 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.14■□□□□ 0.65
CD48P09326 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.14■□□□□ 0.65
CD48P09326 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CD48P09326 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 HOXB1-202ENST00000577092 1414 ntBASIC19.14■□□□□ 0.65
CD48P09326 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
CD48P09326 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD48P09326 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CD48P09326 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 SDHAP2-201ENST00000455183 2001 ntBASIC19.13■□□□□ 0.65
CD48P09326 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.13■□□□□ 0.65
CD48P09326 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CD48P09326 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms