Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.36■□□□□ 0.05
CTSDP07339 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.36■□□□□ 0.05
CTSDP07339 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 AC097658.1-201ENST00000475555 843 ntBASIC15.36■□□□□ 0.05
CTSDP07339 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.36■□□□□ 0.05
CTSDP07339 PRKY-204ENST00000533551 1019 ntBASIC15.36■□□□□ 0.05
CTSDP07339 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 SOX15-203ENST00000570788 1093 ntBASIC15.36■□□□□ 0.05
CTSDP07339 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CTSDP07339 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CTSDP07339 KRT8P11-201ENST00000409686 1436 ntBASIC15.35■□□□□ 0.05
CTSDP07339 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
CTSDP07339 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 SLC29A4P1-201ENST00000398760 971 ntBASIC15.35■□□□□ 0.05
CTSDP07339 NCF1B-203ENST00000435988 1254 ntBASIC15.35■□□□□ 0.05
CTSDP07339 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.35■□□□□ 0.05
CTSDP07339 AC004264.1-201ENST00000608354 794 ntBASIC15.35■□□□□ 0.05
CTSDP07339 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 MYC-209ENST00000641252 345 ntBASIC15.35■□□□□ 0.05
CTSDP07339 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.35■□□□□ 0.05
CTSDP07339 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CTSDP07339 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CTSDP07339 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.35■□□□□ 0.05
CTSDP07339 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CTSDP07339 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 PKD1P1-201ENST00000458669 6805 ntBASIC15.34■□□□□ 0.05
CTSDP07339 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSDP07339 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSDP07339 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.34■□□□□ 0.05
CTSDP07339 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 Z85996.1-201ENST00000494644 937 ntBASIC15.34■□□□□ 0.05
CTSDP07339 PRSS44-201ENST00000515154 1146 ntBASIC15.34■□□□□ 0.05
CTSDP07339 KRT18P41-201ENST00000518924 1277 ntBASIC15.34■□□□□ 0.05
CTSDP07339 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSDP07339 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSDP07339 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.34■□□□□ 0.05
CTSDP07339 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSDP07339 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 HTR7P1-201ENST00000538670 1336 ntBASIC15.34■□□□□ 0.05
CTSDP07339 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.34■□□□□ 0.05
CTSDP07339 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.34■□□□□ 0.05
CTSDP07339 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CTSDP07339 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms