Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 SDHAP2-201ENST00000455183 2001 ntBASIC18.74■□□□□ 0.59
HLA-DQB2P05538 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 AP000523.1-201ENST00000398242 1049 ntBASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB2P05538 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 BICD1-207ENST00000551848 1962 ntBASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 AC009102.3-201ENST00000623118 1491 ntBASIC18.73■□□□□ 0.59
HLA-DQB2P05538 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 MIR149-201ENST00000384879 89 ntBASIC18.73■□□□□ 0.59
HLA-DQB2P05538 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 GCSHP2-201ENST00000560971 527 ntBASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLA-DQB2P05538 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 COX11P1-201ENST00000489116 835 ntBASIC18.72■□□□□ 0.59
HLA-DQB2P05538 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQB2P05538 AL441883.1-201ENST00000566170 1045 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms